Editors: J.P. Liu

Focus on Numerical Analysis

Table of Contents:
Preface. Contents: Asymptotic Spectral Invariants of Differential Operators on Curved Manifolds: Computer Algebra Approach (Vladimir V. Kornyak, Joint Institute for Nuclear Research, Russia); Interval Experimental Data Filling (Marek W. Gutowski, Polish Academy of Sciences, Warszawa); Differential Quadrature, Generalized Methods and Related Discrete Element Analysis Methods for Generic Scientific and Engineering Problems Having Arbitrary Domain Configurations (Chang-New Chen, National Chen Kung University, Taiwan); An Operatorial Approach to Solutions of Boundary Value Problems in the Half-Plane (Caterina Cassisa and Paolo Emilio Ricci, Universita degli Studi di Roma, Italy); Spectra of 2D H-Donors in Magnetic Field and their Zeeman Splitting (Maen Odeh, Eastern Mediterranean University, Turkey); Index.

Binding: Hardcover
Pub. Date: 2005

ISBN: 1-59454-453-0


Andrew D. Bates and Anthony Maxwell

DNA Topology

(Hardback)0-19-856709-X
(Paperback)0-19-850655-4
Publication date: 10 February 2005
216 pages, numerous line drawings and halftones, 234mm x 156mm

Description

Comprehensive but concise overview of DNA structure and function
Clear and accessible explanation of complex topological concepts
Describes the biological significance of the topological aspects of DNA structure
Accompanying website provides ancillary material

DNA as the genetic material is a topic of intense interest in the 21st century, with the genomes of many organisms having been sequenced. The double helix structure discovered by Watson and Crick 50 years ago is now very familiar and its importance for DNA function is widely appreciated. However, it has become clear that there are many deviations from this basic structure that have important biological consequences. Prominent among these are the 'topological' configurations: supercoiling, knotting, and catenation (linking). Unfortunately, a full understanding of these features of DNA structure requires the grasp of concepts that can prove difficult for both students and more advanced researchers. This book aims to explain these ideas simply, but rigorously, to allow a wider appreciation of DNA topology.

DNA Topology starts with a basic account of DNA structure before going on to cover DNA supercoiling, the definitions and physical meanings of linking number, twist, and writhe, and the free energy associated with supercoiling. It then considers the rather more complex description of DNA lying on a curved surface and its application to the nucleosome, followed by the phenomena of DNA knotting and catenation. The final chapters deal with the topoisomerases, the enzymes that control DNA topology, and, most importantly, with the biological significance of the topological aspects of DNA structure. Although some of these concepts are quite complex, they are presented in an accessible way, drawing on interesting and relevant examples.

Readership: Students and researchers of DNA topology, molecular biology, biochemistry and genetics.

Contents
1 DNA structure
2 DNA supercoiling
3 DNA on surfaces
4 Knots and catenanes
5 DNA topoisomerases
6 Biological consequences of DNA topology

Chaplain, Mark A.J.

Mathematical Modeling of Tumor Growth

Series: Interdisciplinary Applied Mathematics, Preliminary entry 100
2003, Approx. 350 p., Hardcover
ISBN: 0-387-40324-8

About this book

Preliminary: Over the last decade or so there has been renewed interest in the mathematical modeling of tumor growth. This book presents an overview of recent mathematical models developed to examine the many stages of cancer growth and development from a single mutant cell through to the metastatic spread of the disease. The mathematical models employed are ordinary and partial differential equation models, discrete models, and continuum mechanics models. Various analytical and numerical methods are used in the analysis of these models and at all times clinical implications of the model results are considered.

Table of contents

Preface * Biology/Pathology of Cancer * Modeling the Immune Response to Cancer * Simple Models of Tumor Growth * Modeling Avascular, Multicellular Spheroid Growth * Pre-pattern Models of Tumor Growth * Modeling Tumor-induced Angiogenesis * Modeling Invasion and Metastasis * Mechanical Models of Growth * Index

Shao, Jun

Mathematical Statistics: Exercises and Solutions

2005, XXVIII, 359 p., Softcover
ISBN: 0-387-24970-2

About this book

This book consists of solutions to four hundred exercises, over 95% of which are in the authorfs Mathematical Statistics. That textbook covers topics in statistical theory essential for graduate students preparing for work on a Ph.D. degree in statistics.

On the other hand, this is a stand-alone book, since exercises and solutions are comprehensible independently of their source. Many solutions involve standard exercises that appear in other textbooks listed in the references. To help readers not using this book with Mathematical Statistics, lists of notation, terminology, and some probability distributions are given in the front of the book.

Readers are assumed to have a good knowledge in advanced calculus. A course in real analysis or measure theory is highly recommended. If this book is used with a statistics textbook that does not include probability theory, then knowledge in measure-theoretic probability theory is required. The exercises are grouped into seven chapters with titles matching those in Mathematical Statistics.

Table of contents

Probability Theory.- Fundamentals of Statistics.- Unbiased Estimation .- Estimation in Parametric Models.- Estimation in Nonparametric Models.- Hypothesis Tests.- Confidence Sets.

Sneyd, James (Ed.)

Tutorials in Mathematical Biosciences II
Mathematical Modeling of Calcium Dynamics and Signal Transduction

Series: Lecture Notes in Mathematics Vol. 1867
2005, X, 202 p. 87 illus., 16 in colour with blank pages:
Softcover ISBN: 3-540-25439-0

About this textbook

This book presents a series of models in the general area of cell physiology and signal transduction, with particular attention being paid to intracellular calcium dynamics, and the role played by calcium in a variety of cell types. Calcium plays a crucial role in cell physiology, and the study of its dynamics lends insight into many different cellular processes. In particular, calcium plays a central role in muscular contraction, olfactory transduction and synaptic communication, three of the topics to be addressed in detail in this book. In addition to the models, much of the underlying physiology is presented, so that readers may learn both the mathematics and the physiology, and see how the models are applied to specific biological questions.

It is intended primarily as a graduate text or a research reference. It will serve as a concise and up-to-date introduction to all those who wish to learn about the state of calcium dynamics modeling, and how such models are applied to physiological questions.

Table of contents

Preface.- Introduction.- Basic Concept of Ca2+ Signaling in Cells and Tissues (M. J. Sanderson).- Modeling IP-3-Dependent Calcium Dynamics in Non-Excitable Cells (J. Sneyd).- Integrated Calcium Management in Cardiac Myocytes (T. R. Shannon).- Mechanisms and Models of Cardiac Excitation-Contraction Coupling (R. L. Winslow, R. Hinch, J. L. Greenstein).- Mathematical Analysis of the Generation of Force and Motion in Contracting Muscle (E. Pate).- Signal Transduction in Vertebrate Olfactory Receptor Cells (J. Reisert).- Mathematical Models of Synaptic Transmission and Short-Term Plasticity (R. Bertram).

Clarkson, D.B., Fraley, C., Gu, C.C., Ramsay, J.O.

S+Functional Data Analysis User's Guide

2005, XII, 194 p. 79 illus., Softcover
ISBN: 0-387-24969-9

About this book

S+Functional Data Analysis is the first commercial object oriented package for exploring, modeling, and analyzing functional data. Functional data analysis (FDA) handles longitudinal data and treats each observation as a function of time (or other variable). The functions are related. The goal is to analyze a sample of functions instead of a sample of related points.

FDA differs from traditional data analytic techniques in a number of ways. Functions can be evaluated at any point in their domain. Derivatives and integrals, which may provide better information (e.g. graphical) than the original data, are easily computed and used in multivariate and other functional analytic methods.

The analyst using S+FDA can handle irregularly spaced data or data with missing values. For large amounts of data, working with a functional representation can save storage. Moreover, S+FDA provides a variety of analytic techniques for functional data including linear models, generalized linear models, principal components, canonical correlation, principal differential analysis, and clustering.

This book can be considered a companion to two other highly acclaimed books involving James Ramsay and Bernard Silverman: Functional Data Analysis, Second Edition (2005) and Applied Functional Data Analysis (2002). This user's manual also provides the documentation for the S+FDA library for S-Plus.

Table of contents

Introduction.- Basis Objects and Operations.- Functional Data Objects and Operations.- Linear Differential Operators and Smoothing.- Functional Registration.- Functional Linear Models.- Functional Generalized Linear Models.- Functional Principal Components.- Canonical Correlation.- Functional Cluster Analysis.- Principal Differential Analysis.